MASH ExplorerThe Ge lab was awarded NIH R01GM125085-01A1 for MASH Explorer software development. We are currently migrating our MASH software information to a new website, supported by the grant. Click HERE to view the new website.
Announcement: We are excited to announce that MASH Explorer will be released at the 2019 ASMS conference in Atlanta!
- MASH Explorer is available via the website HERE for download.
Come meet the MASH Team at our ASMS posters (MP 785 and TP 730) to learn more!
MASH SUITEOur group has developed MASH Suite, a user-friendly and versatile software interface for processing high-resolution mass spectrometry data. MASH Suite contains a wide range of features that allow users to easily navigate through data analysis, visualize complex high-resolution mass spectrometry data and manually validate automatically processed results.
MASH Suite developed by Ge Research Group is freely available to the mass spectrometry community. We aim to bring in a user-friendly environment to facilitate high-resolution mass spectrometry data analysis with high accuracy. MASH Suite requires a Windows operating system with Microsoft.NET Framework 4 and Xcalibur (18.104.22.1684 or more recent versions) pre-installed before MASH Suite can be operated. Details on the design of the program and examples of the functions have been published (1). The development of MASH Suites has been supported by the Wisconsin Partnership Fund for a Healthy Future, American Heart Association Scientist Development Grant 0735443Z, NIH R01HL096971 and R01HL109810.
Users are REQUIRED to cite the paper as follows (1) for any manuscript/publication that has utilized MASH Suites for their data processing.
(1) Guner H., Close P. L., Cai W., Zhang H., Peng Y., Gregorich Z. R., Ge Y.: MASH Suite: A User-Friendly and Versatile Software Interface for High-Resolution Mass Spectrometry Data Interpretation and Visualization, J. Am. Soc. Mass Spectrom. (2014) 25:464-470 (DOI 10.1007/s13361-013-0789-4).
Submit your request for MASH Suite
MASH SUITE ProOur group has developed MASH Suite Pro, a comprehensive tool for top-down protein identification, quantitation and characterization. MASH Suite Pro also provides visualization features for the validation of the computational outputs.
MASH Suite Pro developed by Ge Research Group is freely available to the mass spectrometry community. We aim to bring in a comprehensive tool for top-down protein identification, quantitation and characterization with high accuracy and simplicity. MASH Suite Pro requires a Windows operating system with Microsoft.NET Framework 4.5 and Xcalibur (version 2.2 or higher) pre-installed before the program can be operated. Installation of TopPIC is required to use the TopPIC function in the Search wizard. Details on the design of the program and examples of the functions have been published (2).
The development of MASH Suite Pro has been supported by NIH R01HL096971 and R01HL109810.
Users are REQUIRED to cite the paper as follows (2) for any manuscript/publication that has utilized MASH Suite Pro for their data processing.
(2) Cai, W.; Guner, H.; Gregorich, Z. R.; Chen, A. J.; Ayaz-Guner, S.; Peng, Y.; Valeja, S. G.; Liu, X.; Ge, Y. MASH Suite Pro: A Comprehensive Software Tool for Top-down Proteomics, Mol. Cell. Proteomics 2016 Feb;15(2):703-14. doi:10.1074/mcp.O115.054387.
Submit your request for MASH SUITE Pro
Importanct Notice: Mash Suite Pro is non-functional on Windows 10 unless you have Microsoft Visual C++ 2010 Runtime installed in your operating system (as shown in the picture here). We are currently working on a solution to the problem.